PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG032104.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family TCP
Protein Properties Length: 395aa    MW: 42672.8 Da    PI: 7.4477
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG032104.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP133.12.5e-41792332115
          TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 
                  ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++          
  CCG032104.1  79 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSIPshlrsgsfnp 176
                  789******************************************************************99988888888888777777776777777 PP

          TCP  89 .............................kaaksaa.kskksqksaasalnlakesr 115
                                               ++++ +a  + k++ +++s l+l+ e+ 
  CCG032104.1 177 nfslqqrsrslfpgigletpqpptflsfqSSNNLNAvLQAKQELRDNSSLELSTETE 233
                  777777777888888777777777776653333333355555555555555555444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.8E-4383252IPR005333Transcription factor, TCP
PROSITE profilePS5136927.92385139IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MEGGDDQFHH QHHHQHHHRP TFPFQLLEKK EDEPCSSSSP YPSLPISTTE PNSNSNSTNT  60
NHSSSNLQIE VAEPSKKPPP KRTSTKDRHT KVDGRGRRIR MPALCAARVF QLTRELGHKS  120
DGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISLRSSG SSMSIPSHLR SGSFNPNFSL  180
QQRSRSLFPG IGLETPQPPT FLSFQSSNNL NAVLQAKQEL RDNSSLELST ETEESLSRKR  240
RSEQDLSPSQ QHQVGNYLLQ SSTGAIPASH GQIPANFWML ANSNNNQVMS GDPIWTFPSA  300
NNSSVYRGSM SSGLHFMNFP APVTLLPSQQ LGSTSIGGAS AGNSGISEGH LNMLAGLNPY  360
RPSGLSESQA SGSHSHHGGG GGGSDDRHDT TSHHS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236241SRKRRS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011043408.10.0PREDICTED: transcription factor TCP14-like
SwissprotQ93Z001e-68TCP14_ARATH; Transcription factor TCP14
TrEMBLU5FYG40.0U5FYG4_POPTR; Uncharacterized protein
STRINGPOPTR_0011s05430.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21203280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.12e-51TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14